TY  - JOUR
A1  - Chasman, D 
A1  - Walters, K B
A1  - Lopes, T J
A1  - Eisfeld, A J
A1  - Kawaoka, Y 
A1  - Roy, S 
T1  - Integrating transcriptomic and proteomic data using predictive regulatory network models of host response to pathogens.
Y1  - 2016/07/12
N1  - R835737C005
N1  - R835737
JF  - PLOS COMPUTATIONAL BIOLOGY
VL  - 12
IS  - 7
SP  - e1005013 (42 pp.)
ER  - 


TY  - JOUR
A1  - Chasman, D 
A1  - Fotuhi, S 
A1  - Roy, S 
T1  - Network-based approaches for analysis of complex biological systems.
Y1  - 2016/06/
N1  - R835737C005
N1  - R835737
JF  - CURRENT OPINION IN BIOTECHNOLOGY
J1  - CURR OPIN BIOTECH
VL  - 39
SP  - 157
EP  - 166
ER  - 


TY  - JOUR
A1  - Chasman, D 
A1  - Roy, S 
T1  - Inference of cell type specific regulatory networks on mammalian lineages.
Y1  - 2017/04/
N1  - R835737C005
N1  - R835737
N1  - R835737C004
JF  - CURRENT OPINION IN SYSTEMS BIOLOGY
VL  - 2
SP  - 130
EP  - 139
ER  - 


TY  - JOUR
A1  - Garcia, K 
A1  - Chasman, D 
A1  - Roy, S 
A1  - Ane, J 
T1  - Physiological responses and gene co-expression network of mycorrhizal roots under K<sup>+</sup> deprivation.
Y1  - 2017/03/
N1  - R835737C005
N1  - R835737
N1  - R835737C004
JF  - PLANT PHYSIOLOGY
J1  - PLANT PHYSIOL
VL  - 173
IS  - 3
SP  - 1811
EP  - 1823
ER  - 


TY  - JOUR
A1  - Roy, S 
A1  - Sridharan, R 
T1  - Chromatin module inference on cellular trajectories identifies key transition points and poised epigenetic states in diverse developmental processes.
Y1  - 2017/07/
N1  - R835737C005
N1  - R835737C004
VL  - 27
IS  - 7
SP  - 1250
EP  - 1262
ER  - 


TY  - JOUR
A1  - Siahpirani, A 
A1  - Roy, S 
T1  - A prior-based integrative framework for functional transcriptional regulatory network inference.
Y1  - 2017/02/
N1  - R835737C005
VL  - 45
IS  - 4
SP  - e21 (22 pp.)
ER  - 


TY  - JOUR
A1  - Wheeler, H E
A1  - Ploch, S A
A1  - Barberia, A N
A1  - Bonazzola, R 
A1  - Andaleon, A 
A1  - Fotuhi, S 
A1  - Saha, A 
A1  - Battle, A 
A1  - Roy, S 
A1  - Im, H K
T1  - Imputed gene associations identify replicable trans-acting genes enriched in transcription pathways and complex traits
Y1  - 2019/04/
N1  - R835737C005
JF  - GANET EPIDIMIOL
ER  - 


TY  - JOUR
T1  - Chromatin module inference on cellular trajectories identifies key
transition points and poised epigenetic states in diverse developmental processes.
Y1  - 2017/07/
N1  - R835737C005
N1  - R835737
VL  - 27
IS  - 7
SP  - 1250
EP  - 1262
ER  -